Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria atlantica
Accession NumberCYPS00000000.1
Gene Summary
Adenine Count
1054524 bp
Thymine Count
1045950 bp
Guanine Count
1358557 bp
Cytosine Count
1366897 bp
Genome Length
4825935 bp
Protein-coding Genes
4701 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator yofa | RUM4293_04315 | Not Available | - | 4382294 - 4383124 | 30745.0 |
| phosphonate degradation operons associated hdig domain protein | RUM4293_04316 | Not Available | + | 4383225 - 4383815 | 22934.5 |
| agmatinase | RUM4293_04317 | P72703 | - | 4383812 - 4384654 | 30181.8 |
| carboxynorspermidine/carboxyspermidine decarboxylase | RUM4293_04318 | A8FNH9 | - | 4384651 - 4385820 | 42729.8 |
| homospermidine synthase | RUM4293_04319 | P0DPE4 | - | 4385896 - 4387119 | 45206.5 |
| biosynthetic arginine decarboxylase | RUM4293_04320 | Q5LIQ3 | - | 4387142 - 4389031 | 69724.5 |
| hypothetical protein | RUM4293_04321 | Not Available | - | 4389133 - 4390218 | 38296.5 |
| iron-regulated protein a precursor | RUM4293_04322 | Not Available | - | 4390222 - 4391232 | 36379.7 |
| putative thiol oxidoreductase | RUM4293_04323 | Not Available | - | 4391236 - 4392783 | 56232.9 |
| bacterioferritin | RUM4293_04324 | Q59738 | - | 4392743 - 4393228 | 18489.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.