Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria atlantica
Accession NumberCYPS00000000.1
Gene Summary
Adenine Count
1054524 bp
Thymine Count
1045950 bp
Guanine Count
1358557 bp
Cytosine Count
1366897 bp
Genome Length
4825935 bp
Protein-coding Genes
4701 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytosine deaminase | RUM4293_04245 | P25524 | + | 4291734 - 4293035 | 46869.6 |
| hypothetical protein | RUM4293_04246 | Not Available | - | 4293069 - 4293482 | 15376.2 |
| hypothetical protein | RUM4293_04247 | Not Available | + | 4294182 - 4294559 | 13396.0 |
| biphenyl dioxygenase subunit alpha | RUM4293_04248 | Not Available | - | 4294810 - 4296042 | 46338.4 |
| trimethylamine dehydrogenase | RUM4293_04249 | P16099 | - | 4296042 - 4298102 | 75421.9 |
| putrescine-binding periplasmic protein precursor | RUM4293_04250 | P44731 | - | 4298163 - 4299224 | 38718.9 |
| spermidine/putrescine import atp-binding protein pota | RUM4293_04251 | Not Available | - | 4299242 - 4300339 | 40026.2 |
| inner membrane abc transporter permease protein ydcv | RUM4293_04252 | P45169 | - | 4300336 - 4301124 | 28927.0 |
| spermidine/putrescine transport system permease protein potb | RUM4293_04253 | Not Available | - | 4301121 - 4301978 | 31194.0 |
| solvent efflux pump srpabc operon corepressor | RUM4293_04254 | B4SHW1 | + | 4302100 - 4302753 | 24259.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.