Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria atlantica
Accession NumberCYPS00000000.1
Gene Summary
Adenine Count
1054524 bp
Thymine Count
1045950 bp
Guanine Count
1358557 bp
Cytosine Count
1366897 bp
Genome Length
4825935 bp
Protein-coding Genes
4701 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hopanoid-associated sugar epimerase | RUM4293_04214 | Q9SK66 | + | 4254618 - 4255601 | 35867.4 |
| undecaprenyl-diphosphatase | RUM4293_04215 | Q5LLZ3 | - | 4255602 - 4256405 | 28533.8 |
| glutamate synthase | RUM4293_04216 | Q05756 | + | 4256635 - 4258068 | 51864.3 |
| hypothetical protein | RUM4293_04217 | O14034 | + | 4258095 - 4258529 | 15703.6 |
| glutamate synthase | RUM4293_04218 | Q05755 | + | 4258526 - 4263058 | 164087.0 |
| penicillin-binding protein 2d | RUM4293_04219 | Q28VR9 | + | 4263220 - 4263954 | 27030.6 |
| hypothetical protein | RUM4293_04220 | A0A0H3CDY2 | + | 4264013 - 4264678 | 25743.8 |
| epoxyqueuosine reductase | RUM4293_04221 | F7ZDR3 | + | 4264759 - 4265796 | 38046.2 |
| acetophenone carboxylase gamma subunit | RUM4293_04222 | Q01262 | + | 4265869 - 4267872 | 69956.0 |
| peptide methionine sulfoxide reductase msra 3 | RUM4293_04223 | Q7UJI2 | - | 4267899 - 4268408 | 19084.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.