Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria atlantica
Accession NumberCYPS00000000.1
Gene Summary
Adenine Count
1054524 bp
Thymine Count
1045950 bp
Guanine Count
1358557 bp
Cytosine Count
1366897 bp
Genome Length
4825935 bp
Protein-coding Genes
4701 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfur carrier protein this | RUM4293_04104 | Not Available | - | 4146133 - 4146327 | 6888.4 |
| glycine oxidase | RUM4293_04105 | O34292 | - | 4146311 - 4147288 | 35839.1 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | RUM4293_04106 | P56904 | - | 4147285 - 4148088 | 27001.6 |
| chaperone protein dnaj | RUM4293_04107 | Q5LWJ5 | - | 4148369 - 4149523 | 40712.9 |
| heat shock protein 70 | RUM4293_04108 | Q5LWJ6 | - | 4149598 - 4151508 | 68720.3 |
| alpha-ketoglutarate-dependent dioxygenase alkb | RUM4293_04109 | P0CAT7 | + | 4151721 - 4152323 | 22074.7 |
| polysialic acid transport protein kpsm | RUM4293_04110 | Not Available | - | 4152320 - 4153141 | 30514.4 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | RUM4293_04111 | Q8XCG6 | + | 4153265 - 4154062 | 28391.2 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | RUM4293_04112 | Q0AST1 | + | 4154062 - 4154862 | 28672.1 |
| udp-glucose 4-epimerase | RUM4293_04113 | P26503 | + | 4154932 - 4155915 | 35649.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.