Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas plecoglossicida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil environments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas plecoglossicida str. DJ-1
Accession NumberNTME00000000.1
Gene Summary
Adenine Count
1167781 bp
Thymine Count
1176646 bp
Guanine Count
1949078 bp
Cytosine Count
1932698 bp
Genome Length
6226203 bp
Protein-coding Genes
5639 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | CMV24_28295 | Not Available | - | 5904531 - 5904860 | 12052.3 |
| hypothetical protein | CMV24_28300 | Not Available | - | 5904924 - 5905619 | 25195.2 |
| rna polymerase-associated protein rapa | CMV24_28305 | Not Available | + | 5905781 - 5908627 | 106011.0 |
| bifunctional diguanylate cyclase/phosphodiesterase | CMV24_28310 | Not Available | + | 5908948 - 5911212 | 82700.5 |
| nad(p)-dependent oxidoreductase | CMV24_28315 | Not Available | - | 5911112 - 5911999 | 30609.3 |
| duf2288 domain-containing protein | CMV24_28320 | Not Available | - | 5912264 - 5912575 | 11518.7 |
| hypothetical protein | CMV24_28325 | Not Available | + | 5912704 - 5912886 | 6791.51 |
| branched-chain amino acid abc transporter substrate-binding protein | CMV24_28330 | Not Available | + | 5912935 - 5914050 | 39402.0 |
| high-affinity branched-chain amino acid abc transporter permease livh | CMV24_28335 | Not Available | + | 5914236 - 5915159 | 32536.8 |
| high-affinity branched-chain amino acid abc transporter permease livm | CMV24_28340 | Not Available | + | 5915156 - 5916412 | 46290.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
