Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas plecoglossicida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil environments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas plecoglossicida str. DJ-1
Accession NumberNTME00000000.1
Gene Summary
Adenine Count
1167781 bp
Thymine Count
1176646 bp
Guanine Count
1949078 bp
Cytosine Count
1932698 bp
Genome Length
6226203 bp
Protein-coding Genes
5639 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CMV24_27610 | Not Available | + | 5784214 - 5785161 | 34593.0 |
| type iv pili biogenesis protein fimt | CMV24_27615 | Not Available | - | 5785241 - 5785738 | 18028.8 |
| pilus assembly protein pilv | CMV24_27620 | Not Available | + | 5785848 - 5786030 | 6405.88 |
| prepilin-type cleavage/methylation domain-containing protein | CMV24_27625 | Not Available | + | 5786027 - 5786671 | 23978.0 |
| hypothetical protein | CMV24_27630 | Not Available | + | 5786668 - 5787132 | 16964.5 |
| pilus assembly protein pile | CMV24_27635 | Not Available | + | 5787134 - 5787523 | 14211.9 |
| glycine oxidase thio | CMV24_27640 | Not Available | + | 5787578 - 5788675 | 38640.5 |
| hypothetical protein | CMV24_27645 | Not Available | - | 5788768 - 5788998 | 8769.63 |
| outer membrane protein assembly factor bamd | CMV24_27650 | Not Available | - | 5789093 - 5790112 | 38330.8 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | CMV24_27655 | Not Available | + | 5790260 - 5791222 | 35310.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
