Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas plecoglossicida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil environments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas plecoglossicida str. DJ-1
Accession NumberNTME00000000.1
Gene Summary
Adenine Count
1167781 bp
Thymine Count
1176646 bp
Guanine Count
1949078 bp
Cytosine Count
1932698 bp
Genome Length
6226203 bp
Protein-coding Genes
5639 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | CMV24_01715 | Not Available | + | 394685 - 395830 | 41866.9 |
| lytic murein transglycosylase b | CMV24_01720 | Not Available | + | 395848 - 396858 | 37655.7 |
| septal ring lytic transglycosylase rlpa family protein | CMV24_01725 | Not Available | + | 396858 - 397859 | 36033.8 |
| serine-type d-ala-d-ala carboxypeptidase | CMV24_01730 | Not Available | + | 398129 - 399289 | 42217.7 |
| hypothetical protein | CMV24_01735 | Not Available | + | 399363 - 399638 | 10121.2 |
| lipoyl(octanoyl) transferase lipb | CMV24_01740 | Not Available | + | 399638 - 400285 | 23618.4 |
| lipoyl synthase | CMV24_01745 | Not Available | + | 400288 - 401304 | 38003.0 |
| ld-carboxypeptidase | CMV24_01750 | Not Available | + | 401392 - 402330 | 33335.5 |
| lytic murein transglycosylase | CMV24_01755 | Not Available | - | 402452 - 403765 | 47867.9 |
| ribosome alternative rescue factor arfa | CMV24_01760 | Not Available | - | 403826 - 403990 | 6267.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
