Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas plecoglossicida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil environments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas plecoglossicida str. DJ-1
Accession NumberNTME00000000.1
Gene Summary
Adenine Count
1167781 bp
Thymine Count
1176646 bp
Guanine Count
1949078 bp
Cytosine Count
1932698 bp
Genome Length
6226203 bp
Protein-coding Genes
5639 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulation protein nr(i) | CMV24_00440 | Not Available | - | 103307 - 104743 | 53095.5 |
| nitrogen regulation protein nr(ii) | CMV24_00445 | Not Available | - | 104740 - 105825 | 40073.5 |
| chorismate mutase | CMV24_00450 | Not Available | - | 106098 - 106541 | 15705.7 |
| type i glutamate--ammonia ligase | CMV24_00455 | Not Available | - | 106715 - 108121 | 51707.2 |
| trna 4-thiouridine(8) synthase thii | CMV24_00460 | Not Available | + | 108592 - 110046 | 54914.7 |
| translational gtpase typa | CMV24_00465 | Not Available | + | 110174 - 111994 | 67190.6 |
| phopq-activated pathogenicity protein | CMV24_00470 | Not Available | + | 112186 - 113610 | 51721.0 |
| ykgj family cysteine cluster protein | CMV24_00475 | Not Available | - | 113762 - 114166 | 15450.8 |
| glycogen/starch/alpha-glucan phosphorylase | CMV24_00480 | Not Available | + | 114351 - 116801 | 92125.7 |
| class 1 fructose-bisphosphatase | CMV24_00485 | Not Available | + | 117057 - 118067 | 37233.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
