Shewanella baltica str. M1

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella baltica str. M1 is a Gram-negative, rod-shaped bacterium characterized by its ability to exist in pairs or as singles. This microbe functions as a heterotroph, utilizing organic compounds as its primary energy source, which enables it to thrive in a variety of habitats. Notably, S. baltica str. M1 exhibits facultative anaerobic metabolism, allowing it to adapt to both aerobic and anaerobic environments. The versatility in energy acquisition and oxygen utilization suggests that S. baltica str. M1 may play significant roles in biogeochemical cycles, particularly in environments where organic matter decomposition occurs. Its presence in diverse habitats implies a potential for interaction with various microbial communities and ecosystems. Understanding the metabolic capabilities and ecological niches of S. baltica str. M1 can provide insights into its role in nutrient cycling, particularly in marine and freshwater ecosystems where organic material is abundant.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella baltica
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shewanella baltica str. M1
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Shewanella baltica str. M1

Accession NumberLWED00000000.1

Gene Summary

Adenine Count

1392922 bp

Thymine Count

1389434 bp

Guanine Count

1194795 bp

Cytosine Count

1190427 bp

Genome Length

5167578 bp

Protein-coding Genes

4255 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+3840552 - 3840564Not Available
C repressorA1L58_04520Q37906-3851864 - 385260727528.9
hypothetical proteinA1L58_04525Not Available+3852897 - 38531248406.25
IntegraseA1L58_04530Not Available+3853117 - 385533384729.8
TransposaseA1L58_04535Not Available+3855394 - 385611627043.7
hypothetical proteinA1L58_04540Not Available+3856122 - 385665820727.3
Hypothetical proteinA1L58_04545Not Available+3856655 - 385717019734.6
hypothetical proteinA1L58_04550Not Available+3857172 - 38573848116.18
Hypothetical proteinA1L58_04555Not Available+3857386 - 385802123729.5
hypothetical proteinA1L58_04560Not Available+3858041 - 385834010904.2

Displaying genes 1 – 10 of 4372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

214 records
Metabolite IDMetabolite nameStructureCAS number
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da
BASm00030222-methyl-cis-aconitateC7H5O6Chemical structure of 2-methyl-cis-aconitateNot available
Average185.113Da
Monoisotopic185.0102586Da
BASm00030584-CDP-2-C-methyl-D-erythritol 2-phosphateC14H22N3O17P3Chemical structure of 4-CDP-2-C-methyl-D-erythritol 2-phosphateNot available
Average597.257Da
Monoisotopic597.0184016Da
BASm00030862-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosaminyl 1-phosphateC34H64NO12PChemical structure of 2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosaminyl 1-phosphateNot available
Average709.8452Da
Monoisotopic709.416613029Da
BASm0003091GDP-4-dehydro-alpha-D-rhamnoseC16H21N5O15P2Chemical structure of GDP-4-dehydro-alpha-D-rhamnoseNot available
Average585.313Da
Monoisotopic585.052036152Da
BASm0003187N-succinyl-(2S,6S)-2,6-diaminoheptanedioateC11H16N2O7Chemical structure of N-succinyl-(2S,6S)-2,6-diaminoheptanedioateNot available
Average288.257Da
Monoisotopic288.096848Da
BASm0003212N(6)-acetyl-N(6)-hydroxy-L-lysineC8H16N2O4Chemical structure of N(6)-acetyl-N(6)-hydroxy-L-lysineNot available
Average204.226Da
Monoisotopic204.111007003Da
BASm0003276S-(5-deoxy-D-ribos-5-yl)-L-homocysteineC9H17NO6SChemical structure of S-(5-deoxy-D-ribos-5-yl)-L-homocysteine15912-98-8
Average267.299Da
Monoisotopic267.077658Da
BASm00032855-methyltetrahydropteroyltri-L-glutamateC30H35N9O12Chemical structure of 5-methyltetrahydropteroyltri-L-glutamateNot available
Average713.663Da
Monoisotopic713.2427119Da
BASm0003308N(2)-succinyl-L-arginineC10H17N4O5Chemical structure of N(2)-succinyl-L-arginineNot available
Average273.27Da
Monoisotopic273.120443243Da

Displaying 71–80 of 214 metabolites