Shewanella baltica str. M1

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella baltica str. M1 is a Gram-negative, rod-shaped bacterium characterized by its ability to exist in pairs or as singles. This microbe functions as a heterotroph, utilizing organic compounds as its primary energy source, which enables it to thrive in a variety of habitats. Notably, S. baltica str. M1 exhibits facultative anaerobic metabolism, allowing it to adapt to both aerobic and anaerobic environments. The versatility in energy acquisition and oxygen utilization suggests that S. baltica str. M1 may play significant roles in biogeochemical cycles, particularly in environments where organic matter decomposition occurs. Its presence in diverse habitats implies a potential for interaction with various microbial communities and ecosystems. Understanding the metabolic capabilities and ecological niches of S. baltica str. M1 can provide insights into its role in nutrient cycling, particularly in marine and freshwater ecosystems where organic material is abundant.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella baltica
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shewanella baltica str. M1
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Shewanella baltica str. M1

Accession NumberLWED00000000.1

Gene Summary

Adenine Count

1392922 bp

Thymine Count

1389434 bp

Guanine Count

1194795 bp

Cytosine Count

1190427 bp

Genome Length

5167578 bp

Protein-coding Genes

4255 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+3840552 - 3840564Not Available
C repressorA1L58_04520Q37906-3851864 - 385260727528.9
hypothetical proteinA1L58_04525Not Available+3852897 - 38531248406.25
IntegraseA1L58_04530Not Available+3853117 - 385533384729.8
TransposaseA1L58_04535Not Available+3855394 - 385611627043.7
hypothetical proteinA1L58_04540Not Available+3856122 - 385665820727.3
Hypothetical proteinA1L58_04545Not Available+3856655 - 385717019734.6
hypothetical proteinA1L58_04550Not Available+3857172 - 38573848116.18
Hypothetical proteinA1L58_04555Not Available+3857386 - 385802123729.5
hypothetical proteinA1L58_04560Not Available+3858041 - 385834010904.2

Displaying genes 1 – 10 of 4372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

214 records
Metabolite IDMetabolite nameStructureCAS number
BASm00035255-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideNot available
Average573.303Da
Monoisotopic573.0531333Da
BASm0003537(R)-3-hydroxy-2-oxo-4-phosphooxybutanoateC4H4O8PChemical structure of (R)-3-hydroxy-2-oxo-4-phosphooxybutanoateNot available
Average211.043Da
Monoisotopic210.9660248Da
BASm0003631(1R,6R)-6-hydroxy-2-succinyl-cyclohexa-2,4-diene-1-carboxylateC11H10O6Chemical structure of (1R,6R)-6-hydroxy-2-succinyl-cyclohexa-2,4-diene-1-carboxylateNot available
Average238.196Da
Monoisotopic238.0488352Da
BASm00036497-chloro-L-tryptophanC11H11ClN2O2Chemical structure of 7-chloro-L-tryptophanNot available
Average238.67Da
Monoisotopic238.0509053Da
BASm0003657N-acetyl-D-muramate 6-phosphateC11H17NO11PChemical structure of N-acetyl-D-muramate 6-phosphateNot available
Average370.228Da
Monoisotopic370.0555681Da
BASm0003692N-succinyl-L-glutamateC9H10NO7Chemical structure of N-succinyl-L-glutamateNot available
Average244.181Da
Monoisotopic244.047372406Da
BASm0003693(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoateC7H7O4Chemical structure of (2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoateNot available
Average155.13Da
Monoisotopic155.034982285Da
BASm00036954-phospho-D-erythronateC4H6O8PChemical structure of 4-phospho-D-erythronateNot available
Average213.059Da
Monoisotopic212.9816749Da
BASm0003700(R)-2-(carboxymethyl)-5-oxo-2,5-dihydro-2-furoateC7H4O6Chemical structure of (R)-2-(carboxymethyl)-5-oxo-2,5-dihydro-2-furoateNot available
Average184.104Da
Monoisotopic184.001885009Da
BASm0003701L-methionine (S)-S-oxideC5H11NO3SChemical structure of L-methionine (S)-S-oxide62697-73-8
Average165.21Da
Monoisotopic165.045964392Da

Displaying 101–110 of 214 metabolites