Shewanella baltica str. M1

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella baltica str. M1 is a Gram-negative, rod-shaped bacterium characterized by its ability to exist in pairs or as singles. This microbe functions as a heterotroph, utilizing organic compounds as its primary energy source, which enables it to thrive in a variety of habitats. Notably, S. baltica str. M1 exhibits facultative anaerobic metabolism, allowing it to adapt to both aerobic and anaerobic environments. The versatility in energy acquisition and oxygen utilization suggests that S. baltica str. M1 may play significant roles in biogeochemical cycles, particularly in environments where organic matter decomposition occurs. Its presence in diverse habitats implies a potential for interaction with various microbial communities and ecosystems. Understanding the metabolic capabilities and ecological niches of S. baltica str. M1 can provide insights into its role in nutrient cycling, particularly in marine and freshwater ecosystems where organic material is abundant.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella baltica
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shewanella baltica str. M1
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Shewanella baltica str. M1

Accession NumberLWED00000000.1

Gene Summary

Adenine Count

1392922 bp

Thymine Count

1389434 bp

Guanine Count

1194795 bp

Cytosine Count

1190427 bp

Genome Length

5167578 bp

Protein-coding Genes

4255 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+3840552 - 3840564Not Available
C repressorA1L58_04520Q37906-3851864 - 385260727528.9
hypothetical proteinA1L58_04525Not Available+3852897 - 38531248406.25
IntegraseA1L58_04530Not Available+3853117 - 385533384729.8
TransposaseA1L58_04535Not Available+3855394 - 385611627043.7
hypothetical proteinA1L58_04540Not Available+3856122 - 385665820727.3
Hypothetical proteinA1L58_04545Not Available+3856655 - 385717019734.6
hypothetical proteinA1L58_04550Not Available+3857172 - 38573848116.18
Hypothetical proteinA1L58_04555Not Available+3857386 - 385802123729.5
hypothetical proteinA1L58_04560Not Available+3858041 - 385834010904.2

Displaying genes 1 – 10 of 4372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

214 records
Metabolite IDMetabolite nameStructureCAS number
BASm00034334-amino-4-deoxychorismateC10H10NO5Chemical structure of 4-amino-4-deoxychorismate133442-18-9
Average224.193Da
Monoisotopic224.056446006Da
BASm0003448(4,5-dihydro-5-oxofuran-2-yl)-acetateC6H5O4Chemical structure of (4,5-dihydro-5-oxofuran-2-yl)-acetateNot available
Average141.103Da
Monoisotopic141.0193322Da
BASm00034561-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideNot available
Average573.2993Da
Monoisotopic573.0509381Da
BASm0003462(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12PChemical structure of (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate3031-95-6
Average454.2833Da
Monoisotopic454.0737086Da
BASm00034704-(phosphooxy)-L-threonineC4H8NO7PChemical structure of 4-(phosphooxy)-L-threonineNot available
Average213.083Da
Monoisotopic213.0049358Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da
BASm0003491(2S)-2-acetolactateC5H7O4Chemical structure of (2S)-2-acetolactateNot available
Average131.108Da
Monoisotopic131.0349823Da
BASm00034972-C-methyl-D-erythritol 2,4-cyclic diphosphateC5H10O9P2Chemical structure of 2-C-methyl-D-erythritol 2,4-cyclic diphosphate143488-44-2
Average276.075Da
Monoisotopic275.9800049Da
BASm0003510adenosylcob(III)inamide phosphateC58H83CoN16O14PChemical structure of adenosylcob(III)inamide phosphateNot available
Average1318.308Da
Monoisotopic1317.534971Da
BASm0003511adenosylcob(III)yrinate a,c-diamideC55H68CoN11O15Chemical structure of adenosylcob(III)yrinate a,c-diamideNot available
Average1182.146Da
Monoisotopic1181.425024Da

Displaying 91–100 of 214 metabolites