Burkholderia pyrrocinia str. DSM 10685

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia pyrrocinia
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatpetrol contaminated soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia pyrrocinia str. DSM 10685

Accession NumberNZ_CP011504.1

Gene Summary

Adenine Count

535921 bp

Thymine Count

540915 bp

Guanine Count

1070580 bp

Cytosine Count

1067338 bp

Genome Length

3214754 bp

Protein-coding Genes

2854 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
adenylate kinaseABD05_RS02785A0K9X1+597794 - 59845624460.3
sdr family nad(p)-dependent oxidoreductaseABD05_RS02790O18404+598704 - 59946225498.2
sirb1 family proteinABD05_RS02795Q87DH6-599528 - 60037031650.7
murein biosynthesis integral membrane protein murjABD05_RS02800B4E9G3-600379 - 60192955784.8
30s ribosomal protein s20ABD05_RS02805B1YVE4+602234 - 6025069534.56
duf3579 domain-containing proteinABD05_RS02810Not Available-602655 - 60297511803.3
ornithine carbamoyltransferaseABD05_RS02815Q39DI7+603388 - 60431735287.2
srpbcc domain-containing proteinABD05_RS02820Q9SLM6-604416 - 60549839924.5
helix-turn-helix transcriptional regulatorABD05_RS02825Not Available-605495 - 60586913728.2
udp-n-acetylmuramate dehydrogenaseABD05_RS02830A0K9X7-606117 - 60716637614.0

Displaying genes 561 – 570 of 7183 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

237 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 237 metabolites