Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Erwiniaceae
Genus
Erwinia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Erwiniaceae |
| Genus | Erwinia |
| Species | Erwinia rhapontici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Erwinia rhapontici str. BIGb0435
Accession NumberSOAQ00000000.1
Gene Summary
Adenine Count
1217589 bp
Thymine Count
1209787 bp
Guanine Count
1423608 bp
Cytosine Count
1436583 bp
Genome Length
5287686 bp
Protein-coding Genes
4744 genes
Non-Coding Genes
240 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dha1 family multidrug/chloramphenicol efflux transport protein-like mfs transporter | EDF84_101990 | Not Available | - | 1059890 - 1061116 | 44127.3 |
| pyruvate kinase | EDF84_101991 | Not Available | - | 1061355 - 1062797 | 51589.6 |
| methyl-accepting chemotaxis protein | EDF84_101992 | Not Available | - | 1063100 - 1065043 | 70470.9 |
| rpir family transcriptional regulator | EDF84_101993 | Not Available | - | 1065660 - 1066532 | 31854.5 |
| glucose-6-phosphate 1-dehydrogenase | EDF84_101994 | Not Available | + | 1066919 - 1068394 | 56088.0 |
| 2-dehydro-3-deoxyphosphogluconate aldolase/(4s)-4-hydroxy-2-oxoglutarate aldolase | EDF84_101995 | Not Available | + | 1068618 - 1069256 | 22238.2 |
| formate-dependent phosphoribosylglycinamide formyltransferase | EDF84_101996 | Not Available | - | 1069303 - 1070481 | 41861.4 |
| hypothetical protein | EDF84_101997 | Not Available | + | 1070620 - 1070916 | 10843.8 |
| 4-hydroxyphenylpyruvate dioxygenase | EDF84_101998 | Not Available | - | 1070965 - 1071783 | 29723.4 |
| uncharacterized membrane protein yebe (duf533 family) | EDF84_101999 | Not Available | + | 1071984 - 1072637 | 23601.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.