Flavobacterium branchiophilum

RodNon-motile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium branchiophilum is a Gram-negative, rod-shaped bacterium that thrives in temperatures between 15°C to 30°C, placing it in the mesophilic temperature preference category. As a heterotroph, this microbe relies on organic compounds as its energy source, whereas as a chemotroph, it derives its energy through chemical reactions. Specifically, F. branchiophilum is a chemoheterotroph, utilizing both organic molecules and inorganic chemicals for energy production. In terms of body sites, F. branchiophilum has been isolated from various locations, including human oral and respiratory tracts, as well as skin and nasal mucosa. It is also found in aquatic environments, such as freshwater lakes and rivers, and has even been detected in the gut of certain fish species. This microbe's ability to inhabit a wide range of environments and hosts is likely due to its versatility in terms of its metabolic capabilities and tolerance for varying oxygen levels. F. branchiophilum is an obligate aerobe, meaning it requires the presence of oxygen to survive and grow. In fact, it is highly sensitive to even brief periods of anaerobiosis, making it susceptible to oxygen deprivation. This characteristic is likely linked to the microbe's ability to produce enzymes that are sensitive to oxygen, such as the periplasmic enzymes involved in the degradation of complex organic molecules. F. branchiophilum has been associated with a range of human diseases and conditions, including respiratory tract infections, skin lesions, and even dental caries. Furthermore, its capacity to form biofilms on dental surfaces has led to its involvement in the development of dental plaque. Despite its potential pathogenicity, F. branchiophilum is also being studied for its potential applications in biotechnology, such as the degradation of pollutants and the production of bioactive compounds.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium branchiophilum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Flavobacterium branchiophilum

Accession NumberPCMW00000000.1

Gene Summary

Adenine Count

1159512 bp

Thymine Count

1166068 bp

Guanine Count

565203 bp

Cytosine Count

570493 bp

Genome Length

3462353 bp

Protein-coding Genes

2974 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
atp-dependent rna helicaseB0A77_14130Not Available+3205101 - 320699070464.2
hypothetical proteinB0A77_14135Not Available+3207078 - 320784228803.8
aminopeptidaseB0A77_14140Not Available+3208026 - 320919844111.6
vapc toxin family pin domain ribonucleaseB0A77_14145Not Available-3209635 - 321000013807.9
cell surface proteinB0A77_14150Not Available-3210196 - 321120936299.2
peptidase dimerization domain proteinB0A77_14160Not Available-3212001 - 321339551330.4
Trna-leuNot AvailableNot Available+3213499 - 3213583Not Available
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabB0A77_14170Not Available+3214066 - 321539150057.6
alpha/beta hydrolaseB0A77_14175Not Available+3215413 - 321609325831.8
murein transglycosylaseB0A77_14180Not Available+3216139 - 321703233734.6

Displaying genes 2771 – 2780 of 3025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites