Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase family protein superfamily | ALO35_00007 | Not Available | Positive | 126196 - 126693 | 18641.0 |
| transcriptional regulator, lysr family | ALO35_00008 | P73123 | Negative | 126748 - 127626 | 32400.3 |
| lysr family transcriptional regulator | ALO35_00009 | Not Available | Negative | 127719 - 128627 | 33900.6 |
| phytanoyl-coa dioxygenase | ALO35_00010 | Not Available | Positive | 128736 - 129554 | 31000.1 |
| histidine transporter, periplasmic histidine-binding protein | ALO35_00011 | Not Available | Positive | 129627 - 130610 | 35916.3 |
| abc transporter atp-binding/permease protein | ALO35_04543 | Not Available | Negative | 130704 - 132575 | 67923.5 |
| transcriptional regulator, tetr family | ALO35_04545 | P75952 | Negative | 132659 - 133285 | 22394.9 |
| major facilitator family transporter | ALO35_00014 | P0C566 | Positive | 133396 - 134397 | 34945.7 |
| major facilitator family transporter | ALO35_00015 | Not Available | Positive | 134399 - 134593 | 6770.52 |
| uncharacterized protein | ALO35_00016 | Not Available | Negative | 134678 - 135361 | 24362.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
