Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Morganellaceae
Genus
Xenorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Morganellaceae |
| Genus | Xenorhabdus |
| Species | Xenorhabdus japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xenorhabdus japonica
Accession NumberFOVO00000000.1
Gene Summary
Adenine Count
1016428 bp
Thymine Count
1023811 bp
Guanine Count
765943 bp
Cytosine Count
754672 bp
Genome Length
3561198 bp
Protein-coding Genes
3043 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homoprotocatechuate degradation operon regulator, hpar | SAMN05421579_10571 | Not Available | - | 842364 - 842804 | 17115.8 |
| 5-carboxy-2-oxohept-3-enedioate decarboxylase hpag1 subunit | SAMN05421579_10572 | Not Available | + | 843249 - 843881 | 23085.7 |
| 5-carboxy-2-oxohept-3-enedioate decarboxylase hpag2 subunit | SAMN05421579_10573 | Not Available | + | 843878 - 844642 | 28568.0 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | SAMN05421579_10574 | Not Available | + | 844639 - 846105 | 53419.2 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | SAMN05421579_10575 | Not Available | + | 846213 - 847094 | 33242.6 |
| 5-carboxymethyl-2-hydroxymuconate delta isomerase | SAMN05421579_10576 | Not Available | + | 847107 - 847508 | 15205.2 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05421579_10577 | Not Available | + | 847614 - 849071 | 51819.3 |
| 2-oxohept-3-enedioate hydratase | SAMN05421579_10578 | Not Available | + | 849129 - 849932 | 29606.5 |
| 2,4-dihydroxyhept-2-enedioate aldolase | SAMN05421579_10579 | Not Available | + | 849968 - 850774 | 28584.4 |
| mfs transporter, acs family, 4-hydroxyphenylacetate permease | SAMN05421579_10580 | Not Available | + | 850883 - 852250 | 51112.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.