Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Pediococcus |
| Species | Pediococcus damnosus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pediococcus damnosus
Accession NumberJQBD00000000.1
Gene Summary
Adenine Count
677734 bp
Thymine Count
676162 bp
Guanine Count
411835 bp
Cytosine Count
425990 bp
Genome Length
2191735 bp
Protein-coding Genes
2034 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IV84_GL000768 | Not Available | - | 941930 - 942397 | 17998.3 |
| 3-hydroxyisobutyrate dehydrogenase | IV84_GL000769 | O34948 | + | 942539 - 943423 | 31343.7 |
| major facilitator superfamily permease | IV84_GL000770 | P96709 | + | 943492 - 944703 | 42853.1 |
| hypothetical protein | IV84_GL000771 | Not Available | + | 944776 - 945327 | 20963.8 |
| glycosyl transferase 2 family protein | IV84_GL000772 | O22007 | - | 945389 - 946324 | 35100.6 |
| abc-type uncharacterized transport system, atpase component | IV84_GL000773 | P77279 | + | 946451 - 947101 | 23875.7 |
| abc-type uncharacterized transport system, permease component | IV84_GL000774 | P77307 | + | 947098 - 947871 | 28031.2 |
| amino acid transport protein | IV84_GL000775 | Not Available | + | 947995 - 949437 | 53147.2 |
| ribosome-recycling factor (rrf) (ribosome-releasi ng factor) | IV84_GL000776 | Q88VJ7 | - | 951091 - 951654 | 20905.0 |
| uridylate kinase | IV84_GL000777 | Q03FT4 | - | 951656 - 952408 | 27146.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
