Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Pediococcus |
| Species | Pediococcus damnosus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | beer; brewery; cider; wine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pediococcus damnosus
Accession NumberJQBD00000000.1
Gene Summary
Adenine Count
677734 bp
Thymine Count
676162 bp
Guanine Count
411835 bp
Cytosine Count
425990 bp
Genome Length
2191735 bp
Protein-coding Genes
2034 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type oligopeptide transport system, periplasmic component | IV84_GL000477 | Not Available | - | 743514 - 745142 | 60005.2 |
| abc-type oligopeptide transport system, periplasmic component | IV84_GL000478 | Not Available | - | 745495 - 747132 | 60425.5 |
| abc-type oligopeptide transport system, periplasmic component | IV84_GL000479 | Not Available | - | 748001 - 749635 | 60707.2 |
| gtpase | IV84_GL000480 | Q8RAS5 | + | 749972 - 751249 | 47615.7 |
| oppa protein | IV84_GL000481 | A2RI74 | - | 751334 - 752959 | 59846.0 |
| amino acid permease-associated protein | IV84_GL000482 | O34739 | + | 753288 - 754622 | 48771.9 |
| hypothetical protein | IV84_GL000483 | Not Available | + | 754640 - 754792 | 5846.76 |
| cora family magnesium transporter | IV84_GL000484 | Not Available | + | 754922 - 755542 | 23530.8 |
| hypothetical protein | IV84_GL000485 | Not Available | - | 755685 - 756083 | 15213.6 |
| glck protein | IV84_GL000495 | Q9KCZ4 | - | 756246 - 757208 | 33613.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
