Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Pediococcus |
| Species | Pediococcus damnosus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pediococcus damnosus
Accession NumberJQBD00000000.1
Gene Summary
Adenine Count
677734 bp
Thymine Count
676162 bp
Guanine Count
411835 bp
Cytosine Count
425990 bp
Genome Length
2191735 bp
Protein-coding Genes
2034 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IV84_GL000084 | Not Available | - | 532998 - 533285 | 10979.9 |
| hypothetical protein | IV84_GL000085 | Q9FCV2 | - | 533348 - 534475 | 41548.1 |
| 4-phosphopantetheinyl transferase | IV84_GL000086 | Q03T07 | - | 534482 - 534841 | 13194.8 |
| dead deah box family atp-dependent rna helicase | IV84_GL000087 | Q9Z6C9 | - | 535134 - 536696 | 57917.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | IV84_GL000088 | P96613 | - | 536874 - 538301 | 52915.0 |
| hypothetical protein | IV84_GL000089 | Not Available | - | 538431 - 539213 | 30609.7 |
| hypothetical protein | IV84_GL000090 | Q38V59 | - | 539285 - 540187 | 33104.5 |
| hypothetical protein | IV84_GL000091 | A8AVK0 | - | 540215 - 540805 | 22147.6 |
| tyrosine-phosphatase protein | IV84_GL000092 | O35016 | + | 540910 - 541377 | 17306.5 |
| sortase (surface protein transpeptidase) | IV84_GL000093 | Not Available | - | 541422 - 542138 | 26861.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
