Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Pediococcus |
| Species | Pediococcus damnosus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pediococcus damnosus
Accession NumberJQBD00000000.1
Gene Summary
Adenine Count
677734 bp
Thymine Count
676162 bp
Guanine Count
411835 bp
Cytosine Count
425990 bp
Genome Length
2191735 bp
Protein-coding Genes
2034 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isef1, transposase | IV84_GL000529 | P35881 | - | 2165073 - 2166245 | 45202.9 |
| hypothetical protein | IV84_GL000531 | Not Available | - | 2168421 - 2168702 | 10915.3 |
| degv family protein | IV84_GL000532 | Q8XPD7 | - | 2168998 - 2169867 | 32325.7 |
| is30 family transposase | IV84_GL000533 | Not Available | - | 2169936 - 2170859 | 36054.0 |
| rna-directed dna polymerase | IV84_GL000534 | Not Available | + | 2171980 - 2172810 | 31965.2 |
| hypothetical protein | IV84_GL000535 | Not Available | - | 2172903 - 2173235 | 12470.2 |
| hypothetical protein | IV84_GL000536 | Not Available | - | 2173319 - 2173606 | 11041.6 |
| hypothetical protein | IV84_GL000567 | Not Available | - | 2173694 - 2174431 | 28109.1 |
| transposase | IV84_GL000568 | Not Available | - | 2174707 - 2175309 | 22292.1 |
| hypothetical protein | IV84_GL000569 | Not Available | - | 2175832 - 2176110 | 10322.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
