Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Pediococcus |
| Species | Pediococcus damnosus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pediococcus damnosus
Accession NumberJQBD00000000.1
Gene Summary
Adenine Count
677734 bp
Thymine Count
676162 bp
Guanine Count
411835 bp
Cytosine Count
425990 bp
Genome Length
2191735 bp
Protein-coding Genes
2034 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-d-galactose (glucosyl)lipopolysaccharide-1, 6-d-galactosyltransferase | IV84_GL000340 | Q06994 | + | 2082150 - 2083178 | 38793.2 |
| isl3 family transposase islasa4c | IV84_GL000341 | Q06715 | - | 2083246 - 2084562 | 50440.1 |
| xpka protein | IV84_GL000380 | Q03H73 | - | 2085239 - 2087626 | 90319.5 |
| gntr family transcriptional regulator | IV84_GL000381 | Not Available | - | 2087845 - 2088567 | 27485.4 |
| glutamate racemase | IV84_GL000382 | Q88V19 | + | 2088766 - 2089593 | 30035.4 |
| xanthosine triphosphate pyrophosphatase | IV84_GL000383 | Q88V20 | + | 2089596 - 2090192 | 22087.6 |
| small-conductance mechanosensitive channel | IV84_GL000384 | O34897 | - | 2090230 - 2091120 | 32559.7 |
| methyl-accepting chemotaxis-like protein | IV84_GL000385 | Not Available | + | 2091261 - 2091662 | 13988.2 |
| hypothetical protein | IV84_GL000386 | Not Available | + | 2091683 - 2092069 | 14347.5 |
| hypothetical protein | IV84_GL000388 | Not Available | + | 2092650 - 2092850 | 7438.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
