Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Pediococcus |
| Species | Pediococcus damnosus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | beer; brewery; cider; wine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pediococcus damnosus
Accession NumberJQBD00000000.1
Gene Summary
Adenine Count
677734 bp
Thymine Count
676162 bp
Guanine Count
411835 bp
Cytosine Count
425990 bp
Genome Length
2191735 bp
Protein-coding Genes
2034 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| utp--glucose-1-phosphate uridylyltransferase | IV84_GL001127 | P58313 | + | 1257269 - 1258177 | 33914.0 |
| thioredoxin-disulfide reductase | IV84_GL001128 | O32823 | + | 1258341 - 1259282 | 33776.0 |
| phosphoglucomutase | IV84_GL001129 | P18159 | + | 1259450 - 1261234 | 66318.0 |
| hd superfamily hydrolase | IV84_GL001130 | Not Available | + | 1261259 - 1261888 | 23982.4 |
| uvrabc system protein b (protein uvrb) (excinuclease abc subunit b) | IV84_GL001131 | Q88YI8 | + | 1262086 - 1264089 | 76130.7 |
| excision endonuclease subunit uvra | IV84_GL001132 | Q88YI7 | + | 1264101 - 1266968 | 105729.0 |
| sugar abc transporterpermease | IV84_GL001133 | O31520 | - | 1267765 - 1268505 | 27750.6 |
| sugar abc transporterpermease | IV84_GL001134 | P29823 | - | 1268583 - 1269494 | 34434.7 |
| sugar abc transporteratpase | IV84_GL001135 | Q2K4V4 | - | 1269487 - 1270545 | 39079.4 |
| hypothetical protein | IV84_GL001136 | Not Available | + | 1270844 - 1271350 | 17376.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
