Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Pediococcus |
| Species | Pediococcus damnosus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | beer; brewery; cider; wine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pediococcus damnosus
Accession NumberJQBD00000000.1
Gene Summary
Adenine Count
677734 bp
Thymine Count
676162 bp
Guanine Count
411835 bp
Cytosine Count
425990 bp
Genome Length
2191735 bp
Protein-coding Genes
2034 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IV84_GL001097 | Q48543 | - | 1229635 - 1230984 | 51642.4 |
| ribose-5-phosphate isomerase a | IV84_GL001098 | Q03E35 | - | 1231071 - 1231757 | 24968.2 |
| hypothetical protein | IV84_GL001099 | Not Available | - | 1231744 - 1232088 | 13247.8 |
| deoxyuridine 5-triphosphate nucleotidohydrolase | IV84_GL001100 | Q9CJ30 | + | 1232280 - 1232816 | 20013.0 |
| dna repair protein rada | IV84_GL001101 | P37572 | + | 1232873 - 1234273 | 51054.1 |
| integral membrane protein | IV84_GL001102 | Q48762 | + | 1234716 - 1235858 | 43134.9 |
| glutamyl-trna synthetase | IV84_GL001103 | Q03E40 | + | 1235981 - 1237468 | 56858.9 |
| cysteinyl-trna synthetase | IV84_GL001104 | Q03E41 | + | 1237628 - 1239034 | 53395.8 |
| ribonuclease iii | IV84_GL001105 | F9UL76 | + | 1239038 - 1239457 | 15756.7 |
| trna rrna methyltransferase | IV84_GL001106 | Q06753 | + | 1239444 - 1240232 | 28570.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
