Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Pediococcus |
| Species | Pediococcus damnosus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | beer; brewery; cider; wine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pediococcus damnosus
Accession NumberJQBD00000000.1
Gene Summary
Adenine Count
677734 bp
Thymine Count
676162 bp
Guanine Count
411835 bp
Cytosine Count
425990 bp
Genome Length
2191735 bp
Protein-coding Genes
2034 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-acetyltransferase | IV84_GL000973 | A5VJ56 | + | 1115575 - 1116285 | 24929.3 |
| m20 m25 m40 family peptidase | IV84_GL000974 | A5VJ57 | + | 1116290 - 1117456 | 42988.2 |
| dihydrodipicolinate synthase | IV84_GL000975 | Q03HT2 | + | 1117485 - 1118408 | 33300.9 |
| dihydrodipicolinate reductase | IV84_GL000976 | A8YUT4 | + | 1118401 - 1119183 | 28376.0 |
| aspartate transaminase | IV84_GL000977 | P16524 | + | 1119204 - 1120403 | 42439.9 |
| aspartate semialdehyde dehydrogenase | IV84_GL000978 | Q04797 | + | 1120432 - 1121499 | 38873.5 |
| transport protein | IV84_GL000979 | P54585 | - | 1121843 - 1123264 | 51595.2 |
| hypothetical protein | IV84_GL000981 | Not Available | - | 1123907 - 1124239 | 12383.0 |
| hypothetical protein | IV84_GL000982 | Not Available | - | 1124250 - 1125197 | 35448.0 |
| hypothetical protein | IV84_GL000983 | Not Available | - | 1125216 - 1125917 | 25349.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
