Novosphingobium subterraneum str. DSM 12447

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium subterraneum str. DSM 12447 is a rod-shaped bacterium that belongs to the genus Novosphingobium. This microorganism exhibits a distinctive morphology characterized by its elongated, cylindrical form, which is typical for members of this genus. As a representative strain, DSM 12447 may possess unique metabolic capabilities, although specific metabolic pathways or substrates utilized by this strain are not provided in the available data. The rod shape of Novosphingobium subterraneum str. DSM 12447 suggests potential adaptations for motility and nutrient acquisition in its environment. This structural feature may facilitate its ability to navigate through various substrates, potentially enhancing its ecological versatility. Members of the Novosphingobium genus are often found in diverse habitats, including soil and aquatic environments, where they may play critical roles in the degradation of complex organic compounds. The unique morphology and potential metabolic versatility of Novosphingobium subterraneum str. DSM 12447 may contribute to its ecological role in biogeochemical cycles, particularly in the breakdown of environmental pollutants. Understanding the functional traits of this bacterium could provide insights into its contributions to microbial community dynamics and its potential applications in bioremediation efforts, highlighting the importance of rod-shaped bacteria in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium subterraneum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium subterraneum str. DSM 12447

Accession NumberJRVC00000000.1

Gene Summary

Adenine Count

897162 bp

Thymine Count

900023 bp

Guanine Count

1556136 bp

Cytosine Count

1532621 bp

Genome Length

4885942 bp

Protein-coding Genes

4632 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
marr family transcriptional regulatorNJ75_00194Not Available+200715 - 20125719369.6
putative plasmid maintenance system killer proteinNJ75_00195Not Available+201340 - 2015347233.5
xre family plasmid maintenance system antidote proteinNJ75_00196Not Available+201524 - 20182610975.3
alpha/beta hydrolase family proteinNJ75_00197Not Available-202130 - 20297229756.8
hydrogenase isoenzymes nickel incorporation protein hypbNJ75_00198Not Available-203363 - 20425632134.6
hydrogenase nickel incorporation protein hypaNJ75_00199Not Available-204256 - 2044988984.77
high-affinity nickel-transport proteinNJ75_00200Not Available-204498 - 20521725010.0
hydrogenase isoenzymes formation protein hypeNJ75_00201Not Available-205233 - 20628236542.1
hydrogenase expression/formation protein hypdNJ75_00202Not Available-206279 - 20741241178.9
phosphoheptose isomeraseNJ75_00203Not Available-207409 - 20809523883.6

Displaying genes 211 – 220 of 4699 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites