Serratia fonticola str. DSM 4576

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia fonticola strain DSM 4576 is a Gram-negative, nonsporulating rod-shaped bacterium that exhibits facultative anaerobic metabolism, utilizing a chemoheterotrophic lifestyle for energy acquisition. This organism is versatile in its habitat, thriving in multiple environments, which suggests a broad ecological adaptability. As a facultative anaerobe, S. fonticola has the ability to grow in both the presence and absence of oxygen, allowing it to exploit various niches where organic substrates are available. The rod shape of this bacterium, combined with its nonsporulating nature, implies a reliance on vegetative growth rather than survival strategies typically associated with spore formation. This characteristic may reflect its ecological adaptations to environments where nutrient availability fluctuates but does not necessitate extreme survival mechanisms. The chemoheterotrophic energy source indicates that S. fonticola can metabolize organic compounds, which could include a range of carbon sources, potentially influencing its interactions with other microorganisms and its role in nutrient cycling. In summary, the ability of Serratia fonticola str. DSM 4576 to thrive in diverse habitats while utilizing organic substrates for energy underscores its ecological versatility, which may contribute to its presence in various microbial communities where organic matter is abundant.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia fonticola
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia fonticola str. DSM 4576
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Serratia fonticola str. DSM 4576

Accession NumberNZ_CP011254.1

Gene Summary

Adenine Count

1392192 bp

Thymine Count

1391277 bp

Guanine Count

1604535 bp

Cytosine Count

1612507 bp

Genome Length

6000511 bp

Protein-coding Genes

5300 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail fiber proteinWN53_RS28535Not Available-293011 - 29518576815.9
Tail fiberWN53_RS26700Q6XQB2-295424 - 29755075320.1
hypothetical proteinWN53_RS01230Not Available-297599 - 2977847035.54
hypothetical proteinWN53_RS01235Not Available-297765 - 29813614285.6
Central tail fiberWN53_RS26705P03749-298133 - 303619195809.0
Tail assembly proteinWN53_RS01245O64334-303677 - 30433022537.3
Tail fiber cell wall hydrolaseWN53_RS01250O64333-304327 - 30503727374.4
Minor tail protein lWN53_RS01255O64332-305040 - 30579227290.1
Putative minor tail proteinWN53_RS01260Not Available-305801 - 30614212520.8
Tail length tape measure proteinWN53_RS28540O64330-306426 - 30785350548.9

Displaying genes 1 – 10 of 5420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

341 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001848D-lysineC6H14N2O2Chemical structure of D-lysine923-27-3
Average146.19Da
Monoisotopic146.1055277Da
BASm0001850D-arginineC6H15N4O2Chemical structure of D-arginine0157-06-02
Average175.2089Da
Monoisotopic175.1195007Da
BASm0001864Cr(6+)CrChemical structure of Cr(6+)Not available
Average51.9961Da
Monoisotopic51.9405119Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002113L-threitolC4H10O4Chemical structure of L-threitolNot available
Average122.1198Da
Monoisotopic122.0579088Da

Displaying 61–70 of 341 metabolites