Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans str. H72
Accession NumberLWCR00000000.1
Gene Summary
Adenine Count
930933 bp
Thymine Count
929341 bp
Guanine Count
1727969 bp
Cytosine Count
1735915 bp
Genome Length
5324244 bp
Protein-coding Genes
4713 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A4V15_01345 | Not Available | + | 285035 - 285442 | 15019.1 |
| cytochrome d ubiquinol oxidase subunit ii | A4V15_01350 | Not Available | + | 285458 - 286537 | 40375.3 |
| recombinase recx | A4V15_01355 | Not Available | - | 287091 - 287498 | 15681.6 |
| dna recombination/repair protein reca | A4V15_01360 | Not Available | - | 287608 - 288651 | 37148.9 |
| damage-inducible protein cina | A4V15_01365 | Not Available | - | 288738 - 289238 | 17265.5 |
| transcriptional regulator | A4V15_01370 | Not Available | + | 289404 - 290441 | 36780.1 |
| ap endonuclease | A4V15_01375 | Not Available | + | 290499 - 291281 | 27837.4 |
| 5s ribosomal rna | Not Available | Not Available | + | 291270 - 291385 | Not Available |
| 2-dehydro-3-deoxygluconokinase | A4V15_01380 | Not Available | + | 291274 - 292203 | 32947.9 |
| mfs transporter | A4V15_01385 | Not Available | + | 292241 - 293524 | 46985.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
