Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | APT59_RS00115 | Not Available | - | 19773 - 21665 | 69085.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | APT59_RS00120 | Not Available | - | 22109 - 23473 | 48215.4 |
| membrane protein insertase yidc | APT59_RS00125 | Not Available | - | 23537 - 25252 | 63692.2 |
| membrane protein insertion efficiency factor yidd | APT59_RS21980 | Not Available | - | 25255 - 25503 | 9268.36 |
| ribonuclease p protein component | APT59_RS00130 | Not Available | - | 25496 - 25897 | 14885.9 |
| 50s ribosomal protein l34 | APT59_RS00135 | Not Available | - | 25910 - 26044 | 5193.58 |
| chromosomal replication initiator protein dnaa | APT59_RS00140 | Not Available | + | 26571 - 28040 | 55364.3 |
| dna polymerase iii subunit beta | APT59_RS00145 | Not Available | + | 28069 - 29172 | 41019.4 |
| dna replication/repair protein recf | APT59_RS00150 | Not Available | + | 29183 - 30292 | 41682.1 |
| dna topoisomerase (atp-hydrolyzing) subunit b | APT59_RS00155 | Not Available | + | 30289 - 32709 | 90356.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
