Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxy-l-fuconate dehydrogenase | SAMN05216279_1463 | Not Available | + | 5683071 - 5683811 | 25235.2 |
| ureidoglycolate lyase | SAMN05216279_1464 | Not Available | + | 5683855 - 5684703 | 30503.3 |
| l-fuconate dehydratase | SAMN05216279_1465 | Not Available | + | 5684811 - 5686103 | 47795.2 |
| l-fuconolactonase | SAMN05216279_1466 | Not Available | + | 5686100 - 5686960 | 31608.6 |
| l-fucose dehydrogenase | SAMN05216279_1467 | Not Available | + | 5686957 - 5687733 | 26988.2 |
| hypothetical protein | SAMN05216279_1468 | Not Available | - | 5688143 - 5688327 | 6360.04 |
| polar amino acid transport system permease protein | SAMN05216279_1471 | Not Available | - | 5688328 - 5688793 | 16679.7 |
| polar amino acid transport system permease protein | SAMN05216279_1472 | Not Available | - | 5688804 - 5689466 | 24230.6 |
| polar amino acid transport system substrate-binding protein | SAMN05216279_1473 | Not Available | - | 5689515 - 5690351 | 30444.3 |
| n-acyl-d-glutamate deacylase/n-acyl-d-amino-acid deacylase | SAMN05216279_1474 | Not Available | - | 5690560 - 5692023 | 51567.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
