Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase v | SAMN05216279_14319 | Not Available | + | 5659644 - 5659940 | 11055.2 |
| dna polymerase v | SAMN05216279_14320 | Not Available | + | 5659930 - 5660286 | 13300.9 |
| transaldolase | SAMN05216279_1441 | Not Available | + | 5660740 - 5660889 | 5357.42 |
| nadh dehydrogenase | SAMN05216279_1442 | Not Available | - | 5660970 - 5662274 | 46937.7 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05216279_1443 | Not Available | - | 5662271 - 5663779 | 53481.8 |
| multidrug efflux pump subunit acrb | SAMN05216279_1444 | Not Available | - | 5663791 - 5666853 | 108012.0 |
| rnd family efflux transporter, mfp subunit | SAMN05216279_1445 | Not Available | - | 5666850 - 5667977 | 38148.6 |
| helix-turn-helix domain-containing protein | SAMN05216279_1446 | Not Available | + | 5668414 - 5669469 | 39300.5 |
| transposase zinc-binding domain-containing protein | SAMN05216279_1447 | Not Available | - | 5669721 - 5671283 | 57210.5 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05216279_1448 | Not Available | - | 5671392 - 5672343 | 33522.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
