Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine reductase, riboflavin biosynthesis | SAMN05216279_1345 | Not Available | + | 5496116 - 5496802 | 24956.5 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05216279_1346 | Not Available | - | 5496799 - 5499024 | 81293.1 |
| hypothetical protein | SAMN05216279_1347 | Not Available | - | 5499376 - 5500752 | 50706.2 |
| pp_05117 | SAMN05216279_1348 | Not Available | - | 5500872 - 5501567 | Not Available |
| hypothetical protein | SAMN05216279_1349 | Not Available | - | 5501599 - 5501865 | 9605.8 |
| acetyltransferase (isoleucine patch superfamily) | SAMN05216279_13410 | Not Available | - | 5501935 - 5502561 | 22894.5 |
| 2-haloacid dehalogenase | SAMN05216279_13411 | Not Available | - | 5502616 - 5503359 | 26986.2 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05216279_13412 | Not Available | + | 5503460 - 5504047 | 21547.0 |
| pas domain s-box-containing protein | SAMN05216279_13413 | Not Available | + | 5504140 - 5506329 | 80185.7 |
| hypothetical protein | SAMN05216279_13414 | Not Available | - | 5506297 - 5507334 | 37108.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
