Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| integrase | SAMN05216279_1335 | Not Available | + | 5473867 - 5475810 | 72717.2 |
| putative iron-dependent peroxidase | SAMN05216279_1336 | Not Available | - | 5475848 - 5476816 | 35374.9 |
| lysr substrate binding domain-containing protein | SAMN05216279_1337 | Not Available | - | 5476935 - 5477750 | 29623.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05216279_1338 | Not Available | - | 5478024 - 5478914 | 32731.8 |
| glutathione-independent formaldehyde dehydrogenase | SAMN05216279_1339 | Not Available | - | 5479384 - 5480598 | 44011.9 |
| hypothetical protein | SAMN05216279_13310 | Not Available | + | 5480916 - 5481035 | 4203.18 |
| dna-binding transcriptional regulator, lysr family | SAMN05216279_13311 | Not Available | - | 5481065 - 5481880 | 29738.8 |
| transposase dde domain-containing protein | SAMN05216279_13312 | Not Available | - | 5483180 - 5484451 | 48423.6 |
| excinuclease abc subunit b | SAMN05216279_13313 | Not Available | + | 5484945 - 5486921 | 74383.9 |
| transcriptional regulator, lysr family | SAMN05216279_13314 | Not Available | - | 5487072 - 5487977 | 33048.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
