Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| (s)-mandelate dehydrogenase | SAMN05216279_13220 | Not Available | + | 5464502 - 5465707 | 44441.6 |
| transposase | SAMN05216279_13221 | Not Available | - | 5465841 - 5466785 | 35817.0 |
| hypothetical protein | SAMN05216279_13222 | Not Available | - | 5466845 - 5467087 | 9508.13 |
| transposase | SAMN05216279_13223 | Not Available | + | 5467606 - 5467752 | 5535.65 |
| putative transposase | SAMN05216279_13224 | Not Available | + | 5468105 - 5468473 | 13866.6 |
| transposase | SAMN05216279_13225 | Not Available | + | 5468887 - 5469858 | 35869.4 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05216279_1331 | Not Available | + | 5470496 - 5471083 | 21239.0 |
| excinuclease abc subunit c | SAMN05216279_1332 | Not Available | + | 5471085 - 5472911 | 67817.1 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMN05216279_1333 | Not Available | + | 5472943 - 5473503 | 20608.9 |
| Trna-gly | Not Available | Not Available | + | 5473565 - 5473640 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
