Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216279_13116 | Not Available | - | 5432485 - 5433015 | 20096.6 |
| hypothetical protein | SAMN05216279_13117 | Not Available | - | 5433855 - 5434013 | 6342.43 |
| hypothetical protein | SAMN05216279_13118 | Not Available | - | 5434528 - 5435223 | 26670.9 |
| hypothetical protein | SAMN05216279_13119 | Not Available | - | 5435220 - 5435390 | 6155.49 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05216279_13120 | Not Available | - | 5435457 - 5436449 | 38237.2 |
| hypothetical protein | SAMN05216279_13121 | Not Available | + | 5436578 - 5437906 | 49415.0 |
| two-component system, ompr family, heavy metal sensor histidine kinase cuss | SAMN05216279_13122 | Not Available | - | 5438902 - 5440317 | 51742.5 |
| two-component system, ompr family, copper resistance phosphate regulon response regulator cusr | SAMN05216279_13123 | Not Available | - | 5440314 - 5440988 | 25811.3 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN05216279_13124 | Not Available | + | 5441254 - 5442462 | 43526.7 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN05216279_13125 | Not Available | + | 5442504 - 5443778 | 45400.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
