Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conjugative transfer pilus assembly protein trah | SAMN05216279_12921 | Not Available | - | 5349422 - 5350852 | 50803.9 |
| conjugal transfer pilus assembly protein traf | SAMN05216279_12922 | Not Available | - | 5350836 - 5351897 | 38518.6 |
| hypothetical protein | SAMN05216279_12923 | Not Available | - | 5351894 - 5352424 | 19237.1 |
| hypothetical protein | SAMN05216279_12924 | Not Available | - | 5352833 - 5354380 | 58917.4 |
| putative transposase | SAMN05216279_12925 | Not Available | - | 5354421 - 5354642 | 8869.47 |
| polar amino acid transport system atp-binding protein | SAMN05216279_12926 | Not Available | + | 5354659 - 5354790 | 4659.73 |
| polar amino acid transport system atp-binding protein | SAMN05216279_12927 | Not Available | + | 5354799 - 5354957 | 5597.73 |
| fad dependent oxidoreductase | SAMN05216279_12928 | Not Available | + | 5354957 - 5355268 | 10696.7 |
| fad dependent oxidoreductase | SAMN05216279_12929 | Not Available | + | 5355681 - 5356274 | 20985.3 |
| transposase | SAMN05216279_12930 | Not Available | + | 5356287 - 5356610 | 12356.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
