Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05216279_12716 | Not Available | - | 5245952 - 5246707 | 27892.6 |
| predicted arabinose efflux permease, mfs family | SAMN05216279_12717 | Not Available | - | 5246741 - 5248039 | 46016.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05216279_12718 | Not Available | + | 5248230 - 5249192 | 35479.5 |
| hypothetical protein | SAMN05216279_12719 | Not Available | - | 5249334 - 5249690 | 13782.0 |
| hypothetical protein | SAMN05216279_12720 | Not Available | + | 5250360 - 5251139 | 27548.3 |
| protein of unknown function duf87 | SAMN05216279_12721 | Not Available | + | 5251139 - 5252623 | 55988.1 |
| hypothetical protein | SAMN05216279_12722 | Not Available | + | 5252595 - 5252921 | 10980.4 |
| hypothetical protein | SAMN05216279_12723 | Not Available | + | 5253817 - 5254125 | 11718.4 |
| hypothetical protein | SAMN05216279_12724 | Not Available | - | 5254132 - 5254419 | 9577.39 |
| site-specific dna-methyltransferase (cytosine-n4-specific) | SAMN05216279_12725 | Not Available | - | 5254505 - 5255752 | 46200.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
