Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix | SAMN05216279_12646 | Not Available | + | 5227183 - 5227530 | 12633.1 |
| hypothetical protein | SAMN05216279_12647 | Not Available | - | 5227548 - 5227892 | 12410.8 |
| hypothetical protein | SAMN05216279_12648 | Not Available | - | 5227968 - 5228165 | 6844.85 |
| dna repair protein radc | SAMN05216279_12649 | Not Available | - | 5228338 - 5228835 | 18020.9 |
| transposase | SAMN05216279_12650 | Not Available | + | 5228911 - 5229219 | 11840.3 |
| hypothetical protein | SAMN05216279_1271 | Not Available | - | 5229256 - 5229490 | 8313.82 |
| dna (cytosine-5)-methyltransferase 1 | SAMN05216279_1272 | Not Available | - | 5229664 - 5231154 | 52141.4 |
| dna (cytosine-5)-methyltransferase 1 | SAMN05216279_1273 | Not Available | - | 5231209 - 5231874 | 24692.6 |
| hypothetical protein | SAMN05216279_1274 | Not Available | - | 5232056 - 5234086 | 72018.2 |
| hypothetical protein | SAMN05216279_1275 | Not Available | + | 5234264 - 5234611 | 12783.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
