Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216279_12539 | Not Available | - | 5164061 - 5164327 | 9905.69 |
| transglycosylase slt domain-containing protein | SAMN05216279_12540 | Not Available | - | 5164356 - 5164991 | 22751.8 |
| trbm protein | SAMN05216279_12541 | Not Available | - | 5165005 - 5165592 | 21544.3 |
| type iv secretion system protein virb6/type iv secretion system protein trbl | SAMN05216279_12542 | Not Available | - | 5165610 - 5167328 | 55992.5 |
| entry exclusion lipoprotein trbk | SAMN05216279_12543 | Not Available | - | 5167339 - 5167566 | 7998.66 |
| p-type conjugative transfer protein trbj | SAMN05216279_12544 | Not Available | - | 5167576 - 5168340 | 27444.5 |
| type iv secretion system protein virb10 | SAMN05216279_12545 | Not Available | - | 5168361 - 5169782 | 49377.6 |
| conjugal transfer protein trbh | SAMN05216279_12546 | Not Available | - | 5169787 - 5170275 | 17004.3 |
| type iv secretion system protein virb9 | SAMN05216279_12547 | Not Available | - | 5170278 - 5171177 | 32663.9 |
| type iv secretion system protein virb5 | SAMN05216279_12548 | Not Available | - | 5171195 - 5171977 | 28704.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
