Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein virb10 | SAMN05216279_12427 | Not Available | + | 5105632 - 5106927 | 46151.6 |
| type iv secretion system protein virb11 | SAMN05216279_12428 | Not Available | + | 5106937 - 5107965 | 38044.6 |
| type iv secretion system protein virb1 | SAMN05216279_12429 | Not Available | + | 5107949 - 5108893 | 33903.0 |
| trbm protein | SAMN05216279_12430 | Not Available | + | 5108922 - 5109251 | 11561.5 |
| pld-like domain-containing protein | SAMN05216279_12431 | Not Available | + | 5109241 - 5109840 | 21220.4 |
| hypothetical protein | SAMN05216279_12432 | Not Available | + | 5109852 - 5110484 | 22827.0 |
| t5orf172 domain-containing protein | SAMN05216279_12433 | Not Available | - | 5110604 - 5111788 | 43857.8 |
| superfamily ii dna or rna helicase | SAMN05216279_12434 | Not Available | - | 5111781 - 5113835 | 76073.1 |
| hypothetical protein | SAMN05216279_12435 | Not Available | - | 5113832 - 5116600 | 102483.0 |
| transcriptional regulator, alpa family | SAMN05216279_12436 | Not Available | - | 5116659 - 5116859 | 7576.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
