Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein | SAMN05216279_12355 | Not Available | - | 5063564 - 5064235 | 24363.2 |
| urease accessory protein | SAMN05216279_12356 | Not Available | - | 5064232 - 5064732 | 18427.8 |
| transcriptional regulator, tetr family | SAMN05216279_12357 | Not Available | - | 5064830 - 5065522 | 25512.2 |
| lysr family transcriptional regulator, pca operon transcriptional activator | SAMN05216279_12358 | Not Available | + | 5065639 - 5066562 | 33628.1 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN05216279_12359 | Not Available | + | 5066663 - 5067388 | 27219.4 |
| protocatechuate 3,4-dioxygenase alpha subunit | SAMN05216279_12360 | Not Available | + | 5067399 - 5068010 | 22657.6 |
| ubiquinone biosynthesis monooxygenase coq7 | SAMN05216279_12361 | Not Available | - | 5068071 - 5068718 | 23764.4 |
| histidine triad (hit) family protein | SAMN05216279_12362 | Not Available | - | 5068759 - 5069100 | 12622.4 |
| hypothetical protein | SAMN05216279_12363 | Not Available | - | 5069182 - 5069970 | 28455.0 |
| putative membrane protein | SAMN05216279_12364 | Not Available | - | 5070019 - 5070444 | 16521.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
