Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05216279_1233 | Not Available | + | 5012179 - 5013567 | 48838.1 |
| single-strand dna-binding protein | SAMN05216279_1234 | Not Available | + | 5013593 - 5014153 | 20554.4 |
| Tmrna,resume consensus sequence (at 88): tatagttgccaacgacga | Not Available | Not Available | + | 5014199 - 5014551 | Not Available |
| ssra-binding protein | SAMN05216279_1236 | Not Available | - | 5014633 - 5015109 | 17793.6 |
| ribosome association toxin past (rata) of the ratab toxin-antitoxin module | SAMN05216279_1237 | Not Available | + | 5015282 - 5015716 | 15908.1 |
| hypothetical protein | SAMN05216279_1238 | Not Available | + | 5015709 - 5016014 | 11393.9 |
| beta-barrel assembly machine subunit bame | SAMN05216279_1239 | Not Available | - | 5016022 - 5016558 | 19139.8 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN05216279_12310 | Not Available | + | 5016653 - 5017057 | 15284.2 |
| dna repair protein recn (recombination protein n) | SAMN05216279_12311 | Not Available | - | 5017121 - 5018788 | 61378.8 |
| molecular chaperone grpe | SAMN05216279_12312 | Not Available | + | 5018955 - 5019518 | 20647.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
