Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ectoine hydrolase | SAMN05216279_12250 | Not Available | - | 4990342 - 4991532 | 43936.3 |
| ornithine cyclodeaminase | SAMN05216279_12251 | Not Available | - | 4991566 - 4992543 | 34320.3 |
| threonine dehydratase | SAMN05216279_12252 | Not Available | - | 4992554 - 4993525 | 33995.9 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05216279_12253 | Not Available | - | 4993667 - 4995064 | 52345.9 |
| polar amino acid transport system substrate-binding protein | SAMN05216279_12254 | Not Available | + | 4995302 - 4996153 | 30020.8 |
| polar amino acid transport system permease protein | SAMN05216279_12255 | Not Available | + | 4996222 - 4996878 | 24226.8 |
| polar amino acid transport system permease protein | SAMN05216279_12256 | Not Available | + | 4996878 - 4997546 | 24986.3 |
| polar amino acid transport system atp-binding protein | SAMN05216279_12257 | Not Available | + | 4997587 - 4998360 | 28480.7 |
| phage tail collar domain | SAMN05216279_12258 | Not Available | - | 4998415 - 4999074 | 23814.7 |
| quinate dehydrogenase (quinone) | SAMN05216279_12259 | Not Available | + | 4999675 - 5002056 | 84682.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
