Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetamidase/formamidase family protein | APT59_RS03605 | Not Available | - | 782067 - 782999 | 32806.1 |
| apc family permease | APT59_RS03610 | Not Available | - | 783026 - 784408 | 49512.6 |
| luxr family transcriptional regulator | APT59_RS03615 | Not Available | + | 784563 - 785327 | 27710.2 |
| nuclear transport factor 2 family protein | APT59_RS03620 | Not Available | + | 785416 - 785886 | 18276.2 |
| lysr family transcriptional regulator | APT59_RS03625 | Not Available | + | 785960 - 786865 | 33088.3 |
| caib/baif coa-transferase family protein | APT59_RS03630 | Not Available | + | 786973 - 788163 | 42140.9 |
| hydroxymethylglutaryl-coa lyase | APT59_RS03635 | Not Available | + | 788160 - 789086 | 32340.0 |
| mfs transporter | APT59_RS03640 | Not Available | + | 789161 - 790546 | 49325.4 |
| multidrug efflux rnd transporter permease subunit | APT59_RS03645 | Not Available | - | 790549 - 793647 | 109759.0 |
| efflux rnd transporter periplasmic adaptor subunit | APT59_RS03650 | Not Available | - | 793647 - 794798 | 41014.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
