Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| k+/h+ antiporter subunit f | APT59_RS01155 | Not Available | - | 252094 - 252363 | 9664.39 |
| na+/h+ antiporter subunit e | APT59_RS01160 | Not Available | - | 252348 - 252845 | 18432.3 |
| monovalent cation/h+ antiporter subunit d | APT59_RS01165 | Not Available | - | 252842 - 254341 | 52536.3 |
| na+/h+ antiporter subunit c | APT59_RS01170 | Not Available | - | 254338 - 254667 | 11706.8 |
| monovalent cation/h+ antiporter subunit a | APT59_RS01175 | Not Available | - | 254669 - 257476 | 100215.0 |
| efflux transporter outer membrane subunit | APT59_RS01180 | Not Available | - | 257908 - 259341 | 51342.5 |
| efflux rnd transporter permease subunit | APT59_RS01185 | Not Available | - | 259338 - 262514 | 114457.0 |
| efflux rnd transporter periplasmic adaptor subunit | APT59_RS01190 | Not Available | - | 262674 - 263891 | 43588.9 |
| lysr family transcriptional regulator | APT59_RS01200 | Not Available | - | 264489 - 265409 | 33973.1 |
| zinc-dependent alcohol dehydrogenase family protein | APT59_RS01205 | Not Available | + | 265559 - 266578 | 36626.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
