Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Genome Summary
Pseudomonas oryzihabitans
Accession NumberFMWB00000000.1
Gene Summary
Adenine Count
988127 bp
Thymine Count
985649 bp
Guanine Count
1870260 bp
Cytosine Count
1886799 bp
Genome Length
5731800 bp
Protein-coding Genes
5280 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APT59_RS22335 | Not Available | - | 209713 - 209904 | 7082.44 |
| dna topoisomerase iii | APT59_RS00960 | Not Available | + | 210149 - 212107 | 71552.5 |
| endonuclease domain-containing protein | APT59_RS00965 | Not Available | - | 212094 - 212426 | 12993.5 |
| hypothetical protein | APT59_RS00970 | Not Available | - | 213146 - 213454 | 11389.3 |
| mfs transporter | APT59_RS00975 | Not Available | - | 213629 - 214936 | 47419.4 |
| sigma-54 dependent transcriptional regulator | APT59_RS00980 | Not Available | - | 215106 - 216431 | 48587.9 |
| hamp domain-containing sensor histidine kinase | APT59_RS00985 | Not Available | - | 216496 - 217869 | 50196.1 |
| response regulator transcription factor | APT59_RS00990 | Not Available | - | 217866 - 218525 | 24737.8 |
| hypothetical protein | APT59_RS00995 | Not Available | - | 218536 - 219183 | 23269.8 |
| sdr family oxidoreductase | APT59_RS01000 | Not Available | - | 219180 - 219989 | 28989.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.



