Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homoserine o-acetyltransferase | SAMN05216372_101711 | Not Available | + | 775556 - 776560 | 36676.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05216372_101712 | Not Available | + | 777010 - 777885 | 30821.2 |
| alcohol dehydrogenase, class iv | SAMN05216372_101713 | Not Available | + | 777900 - 779060 | 40928.9 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05216372_101714 | Not Available | + | 779057 - 780304 | 43579.4 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05216372_101715 | Not Available | + | 780297 - 781319 | 36431.0 |
| solute:na+ symporter, sss family | SAMN05216372_101716 | Not Available | + | 781372 - 782784 | 50480.0 |
| predicted neuraminidase (sialidase) | SAMN05216372_101717 | Not Available | + | 782771 - 783895 | 41952.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05216372_101718 | Not Available | + | 783942 - 784628 | 23456.6 |
| transcriptional regulator, deor family | SAMN05216372_101719 | Not Available | + | 784682 - 785443 | 27260.6 |
| protein of unknown function | SAMN05216372_101720 | Not Available | - | 785640 - 786167 | 19447.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.