Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, gntr family | SAMN05216372_101681 | Not Available | + | 743795 - 744514 | 27255.0 |
| murein l,d-transpeptidase ycbb/ykud | SAMN05216372_101682 | Not Available | - | 744626 - 746239 | 59348.1 |
| l,d-transpeptidase catalytic domain | SAMN05216372_101683 | Not Available | + | 746395 - 747105 | 25857.3 |
| amino acid synthesis | SAMN05216372_101684 | Not Available | + | 747326 - 747916 | 21201.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216372_101685 | Not Available | + | 747930 - 748763 | 29941.0 |
| aldehyde dehydrogenase (acceptor) | SAMN05216372_101686 | Not Available | + | 748760 - 750241 | 52698.0 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05216372_101687 | Not Available | + | 750262 - 750747 | 17078.6 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05216372_101688 | Not Available | + | 750857 - 752308 | 51714.9 |
| 4-carboxymuconolactone decarboxylase | SAMN05216372_101689 | Not Available | + | 752523 - 752921 | 15043.0 |
| dna-binding transcriptional regulator, gntr family | SAMN05216372_101690 | Not Available | + | 752975 - 753724 | 27837.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.