Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sorbitol-binding protein /mannitol-binding protein | SAMN05216372_101601 | Not Available | - | 655955 - 657265 | 47604.4 |
| helix-turn-helix domain-containing protein | SAMN05216372_101602 | Not Available | - | 657491 - 658396 | 34643.1 |
| carbonic anhydrase | SAMN05216372_101603 | Not Available | - | 658695 - 659420 | 26057.0 |
| dna repair photolyase | SAMN05216372_101604 | Not Available | - | 659715 - 660770 | 39594.4 |
| membrane bound fad containing d-sorbitol dehydrogenase | SAMN05216372_101605 | Not Available | + | 660945 - 661451 | 18377.1 |
| choline dehydrogenase | SAMN05216372_101606 | Not Available | + | 661475 - 663109 | 59493.0 |
| cytochrome c, mono-and diheme variants | SAMN05216372_101607 | Not Available | + | 663112 - 664518 | 50247.4 |
| rnd family efflux transporter, mfp subunit | SAMN05216372_101608 | Not Available | + | 664677 - 665792 | 39404.4 |
| rnd family efflux transporter, mfp subunit | SAMN05216372_101609 | Not Available | + | 665789 - 666853 | 38147.9 |
| multidrug efflux pump subunit acrb | SAMN05216372_101610 | Not Available | + | 666850 - 669936 | 112950.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.