Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coenzyme a synthetase | SAMN05216372_1163 | Not Available | + | 4911753 - 4913714 | 71965.7 |
| arginine/ornithine transport system substrate-binding protein | SAMN05216372_1164 | Not Available | + | 4914040 - 4914819 | 28141.8 |
| arginine/ornithine transport system permease protein | SAMN05216372_1165 | Not Available | + | 4914967 - 4915656 | 24919.1 |
| arginine/ornithine transport system permease protein | SAMN05216372_1166 | Not Available | + | 4915667 - 4916365 | 26033.4 |
| arginine/ornithine transport system atp-binding protein | SAMN05216372_1167 | Not Available | + | 4916395 - 4917159 | 28064.1 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05216372_1168 | Not Available | + | 4917213 - 4918193 | 36284.5 |
| hypothetical protein | SAMN05216372_1169 | Not Available | - | 4918244 - 4918597 | 12439.5 |
| cytochrome c oxidase subunit i+iii | SAMN05216372_11610 | Not Available | - | 4918597 - 4921152 | 94219.0 |
| cytochrome c oxidase subunit 2 | SAMN05216372_11611 | Not Available | - | 4921149 - 4922006 | 31524.1 |
| uncharacterized membrane protein | SAMN05216372_11612 | Not Available | + | 4922172 - 4922630 | 16736.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.