Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Phytopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Phytopseudomonas |
| Species | Phytopseudomonas straminea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Japanese rice paddies; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phytopseudomonas straminea
Accession NumberFOMO00000000.1
Gene Summary
Adenine Count
926646 bp
Thymine Count
909157 bp
Guanine Count
1564495 bp
Cytosine Count
1591705 bp
Genome Length
4992198 bp
Protein-coding Genes
4529 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate--putrescine ligase | SAMN05216372_11560 | Not Available | - | 4898571 - 4899938 | 49744.4 |
| methyl-accepting chemotaxis protein | SAMN05216372_11561 | Not Available | - | 4900303 - 4901868 | 56005.2 |
| nadh dehydrogenase, fad-containing subunit | SAMN05216372_11562 | Not Available | - | 4902042 - 4903118 | 38205.4 |
| hd-like signal output (hdod) domain, no enzymatic activity | SAMN05216372_11563 | Not Available | - | 4903321 - 4904538 | 44088.3 |
| 5-aminovalerate transaminase | SAMN05216372_11564 | Not Available | - | 4904707 - 4905987 | 45061.6 |
| glutarate-semialdehyde dehydrogenase /succinate semialdehyde dehydrogenase | SAMN05216372_11566 | Not Available | - | 4906139 - 4907587 | 51624.1 |
| Trna-arg | Not Available | Not Available | + | 4907934 - 4908010 | Not Available |
| protein of unknown function | SAMN05216372_11568 | Not Available | + | 4908398 - 4909228 | 29088.4 |
| c4-dicarboxylate transporter, dctm subunit | SAMN05216372_1161 | Not Available | + | 4909618 - 4909944 | 11665.2 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05216372_1162 | Not Available | - | 4909995 - 4911539 | 56986.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.